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THE BIOLOGY TOOL FIELD GUIDE

Find the right tools for biology research.

Explore practical software for the lab, single-cell data, and microscopy. See what each tool does, what it needs, and where to start.

START WITHLab notebooksSingle-cell dataSegmentation
FIELD FIGURE / 01 ILLUSTRATION
COMPUTATIONAL BIOLOGYSCHEMATIC DATA
01 / COLLECTIONS

Explore by workflow.

View all 24 tools
COLLECTION 01

Lab Software

Notebooks, inventories, and lab operations.

8 TOOLS
COLLECTION 02

Single-cell Analysis

Explore public data or analyze your own.

8 TOOLS
COLLECTION 03

Bioimage Analysis

View, annotate, and quantify microscopy images.

8 TOOLS
02 / EDITORIAL PICKS

A few places to start.

How we select tools
Open source

eLabFTW

Keep experiment notes, attachments, and shared lab records in a searchable browser workspace.

Lab SoftwareSelf-hosted web app
Open source

Scanpy

Move from a single-cell expression matrix to quality checks, clusters, and exploratory plots in Python.

Single-cell AnalysisPython package
Open source

QuPath

Annotate whole-slide images, measure objects, and export measurements from tissue image projects.

Bioimage AnalysisDesktop app
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