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Bioimage Analysis / Library / plugin

Bio-Formats

Read image pixels and acquisition metadata from many microscope formats and export to formats such as OME-TIFF.

Best fit

Researchers opening instrument files in downstream software or preparing standardized microscopy exports.

What you need

A compatible host application such as Fiji or a Bio-Formats installation for programmatic or command-line use.

What to check

Metadata coverage varies by file format. Check that dimensions, pixel sizes, and channel labels survive conversion.