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Single-cell Analysis / Public data portal

CZ CELLxGENE Discover

Browse public single-cell datasets, inspect gene expression and cell annotations, or download data for follow-up analysis.

Best fit

Researchers looking for a public reference dataset before investing in a local analysis.

What you need

A web browser for discovery and exploration; local tools for work on downloaded matrices.

What to check

Only deposited datasets are searchable. Coverage, annotations, and metadata vary across studies.